“”Group 1″” is represented by pEO5, its homologues from other E. coli O26

HMPL-504 supplier strains and by pEO9 and pEO13. “”Group 2″” is represented by pHly152, pEO11 and pEO12. “”Group 3″” is formed by plasmids pEO853, pEO855 and pEO857 from porcine strains. Two strains with α-hly plasmids pEO14 and pEO860 showed individual patterns by PCR-typing (Table 1). In order to explore the differences between the major groups of α-hly-plasmids we determined the nucleotide sequence of the region located between hlyR and hlyC of three representative plasmids, namely pEO9 [GenBank FM210248], pEO11 [FM210249] and pEO853 [FM210347] (Fig. 3). Major differences between the α-hly plasmids

in the region between hlyR and hlyC caused by insertion of IS1 and IS2. While “”group 1″” plasmids (pEO5, pEO9 and pEO13) carry no IS elements all “”group Selleckchem BYL719 2″” plasmids (phly152, pEO11 and pEO12) carry an IS2 element inserted directly downstream of the 3′ end of hlyR (5′ CCTGG 3′) in pEO11. A 326 bp part of the IS2 element was previously described in pHly152 [GenBank M14107] [24], it is 99.4% identical to the corresponding IS2 element of pEO11. The IS2 elements in pEO11 and pHly152 are inserted at the DNA same site and are both flanked by the duplicated 5′ CCTGG 3′ DNA sequence. Plasmids belonging to “”group 3″”, which were all from pig strains (pEO853, pEO855 and pEO857), carry two IS elements in the region between hlyR to hlyC. In pEO853,

this website the 786 bp IS1 is inserted immediately downstream of the hlyR internal Thiamet G sequence 5′ AACAAAATT 3′. This 9 bp DNA stretch is repeated at the right hand end of the inserted IS1 and followed by the 94 bp residual 3′ end of the hlyR region (Fig. 3). The IS2 element of pEO853 is 99.8% similar to that of pEO11 and inserted at the same position as in “”group 2″” plasmids pEO11 and pHly152. Investigation of hlyR-hlyC region of STEC strains of porcine origin We used the primers specific for the region between hlyR to hlyC (Table 1) to investigate 26 α-hemolysin/stx2e STEC strains from diseased pigs or pork meat [29]. PCR products were obtained from all. According to the length of the amplicons generated with primers 1f/r, 32f/r and 44f/r all but one strain showed patterns indicating the presence of a “”group 2″” or “”group 3″” plasmid with IS-elements in the region between hlyR and hlyC (Table 3). The PCR-profiles were closely associated with serotypes of strains causing edema disease in pigs (O138:H14, O139:H1 and O141:H4) suggesting that α-hly plasmids are conserved in these strains. Table 3 Detection of α-hly plasmid specific sequences in porcine STEC strains.   Size of PCR products with primersa Serotype No.